MolNFT v1 · #44377 · protein
Solution structure of holo-acyl carrier protein of leishmania major
2M5R: “Solution structure of holo-acyl carrier protein of leishmania major”. Solution nmr, 1 ligand (PNS), 1 pocket (best druggability 0.67). MolNFT v1 #44377 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2M5R
- Type
- protein
- Length
- 80 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acyl carrier protein
- UniProt
- E9AD06
- Ligands
- PNS
- Pockets
- 1 · best druggability 0.67
Structure
solution nmr · 1 distinct chain · 55% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acyl carrier protein | protein | 80 | 55% helix, 3% strand | E9AD06 |
Ligands and binding sites
- PNS · 4'-phosphopantetheine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 175 | 0.67 | 0.86 | 28 | empty |
Modifications
Observed in the structure: 1 cofactor (phosphopantetheinylation).
Compared structures
- 2M5R · Solution structure of holo-acyl carrier protein of Leishmania major · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E9AD06
- Elsewhere: RCSB PDB 2M5R · PDBe 2M5R · UniProt E9AD06
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