MolNFT v1 · #44230 · protein

Ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1)

2M17 · Ubiquitin-like domain-containing ctd phosphatase 1: “Ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1)”. Solution nmr, 1 ligand (NH2), 1 pocket (best druggability 0.48). MolNFT v1 #44230 on GenesisL1: 3D…

PDB: 2M17
Type: protein
Length: 81 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ubiquitin-like domain-containing ctd phosphatase 1
EC: 3.1.3.16
UniProt: Q8WVY7
Ligands: NH2
Pockets: 1 · best druggability 0.48

Structure

solution nmr · 1 distinct chain · 19% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ubiquitin-like domain-containing ctd phosphatase 1 (EC 3.1.3.16)	protein	81	19% helix, 20% strand	Q8WVY7

Ligands and binding sites

NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	104	0.48	0.80	27	empty

Compared structures

2M17 · ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1) · the same entry in another collection · chain A against A, TM-score 1.00
Q8WVY7 · AlphaFold monomer V2.0 prediction for ubiquitin-like domain- containing ctd phosphatase 1… · a predicted model of the same protein · chain A against A, TM-score 0.76

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8WVY7
Elsewhere: RCSB PDB 2M17 · PDBe 2M17 · UniProt Q8WVY7

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.