MolNFT v1 · #43853 · protein
Solution structure of the M-pmv myristoylated matrix protein
2LPY · Matrix protein P10: “Solution structure of the M-pmv myristoylated matrix protein”. Solution nmr, 1 ligand (MYR), 2 pockets (best druggability 0.76). MolNFT v1 #43853 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2LPY
- Type
- protein
- Length
- 124 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Matrix protein P10
- UniProt
- P07567
- Ligands
- MYR
- Pockets
- 2 · best druggability 0.76
Structure
solution nmr · 1 distinct chain · 54% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Matrix protein P10 | protein | 124 | 54% helix, 0% strand | P07567 |
Ligands and binding sites
- MYR · Myristic acid · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 616 | 0.76 | 0.81 | 53 | MYR |
| 2 | 50 | 0.29 | 0.75 | 15 | empty |
Modifications
Observed in the structure: 1 lipid (myristoylation).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07567
- Elsewhere: RCSB PDB 2LPY · PDBe 2LPY · UniProt P07567
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