MolNFT v1 · #43747 · protein
Minimal constraints solution NMR structure of prospero homeobox protein 1 from homo sapiens, northeast structural genomics consortium target HR4660B
2LMD: “Minimal constraints solution NMR structure of prospero homeobox protein 1 from homo sapiens, northeast…”. Solution nmr, 2 pockets (best druggability 0.67). MolNFT v1 #43747 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 2LMD
- Type
- protein
- Length
- 174 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Prospero homeobox protein 1
- UniProt
- Q92786
- Pockets
- 2 · best druggability 0.67
Structure
solution nmr · 1 distinct chain · 58% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prospero homeobox protein 1 | protein | 174 | 58% helix, 0% strand | Q92786 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 398 | 0.67 | 0.80 | 34 | empty |
| 2 | 52 | 0.29 | 0.75 | 12 | empty |
Compared structures
- 2LMD · Minimal Constraints Solution NMR Structure of Prospero Homeobox protein 1 from Homo… · the same entry in another collection · chain A against A, TM-score 1.00
- Q92786 · AlphaFold monomer V2.0 prediction for prospero homeobox protein 1 (Q92786) · a predicted model of the same protein · chain A against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92786
- Elsewhere: RCSB PDB 2LMD · PDBe 2LMD · UniProt Q92786
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