MolNFT v1 · #43651 · protein

Structure of a protein from haloferax volcanii

2LJI · Small archaeal modifier protein 2: “Structure of a protein from haloferax volcanii”. Solution nmr, 1 pocket (best druggability 0.42). MolNFT v1 #43651 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2LJI
Type: protein
Length: 66 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Small archaeal modifier protein 2
UniProt: D4GZE7
Pockets: 1 · best druggability 0.42

Structure

solution nmr · 1 distinct chain · 15% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Small archaeal modifier protein 2	protein	66	15% helix, 21% strand	D4GZE7

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	107	0.42	0.77	18	empty

Compared structures

2LJI · Structure of a protein from Haloferax volcanii · the same entry in another collection · chain A against A, TM-score 1.00
D4GZE7 · AlphaFold monomer V2.0 prediction for small archaeal modifier protein 2 (D4GZE7) · a predicted model of the same protein · chain A against A, TM-score 0.41

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D4GZE7
Elsewhere: RCSB PDB 2LJI · PDBe 2LJI · UniProt D4GZE7

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