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MolNFT v1 · #43457 · protein

Solution structure of the estrogen receptor-binding stapled peptide SP1 (ac-hxilhxllqds-NH2)

2LDC: “Solution structure of the estrogen receptor-binding stapled peptide SP1 (ac-hxilhxllqds-NH2)”. Solution nmr, 2 ligands (ACE, NH2). MolNFT v1 #43457 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2LDC
Type
protein
Length
11 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Estrogen receptor-binding stapled peptide SP1
Ligands
ACE, NH2

Structure

solution nmr · 1 distinct chain · 64% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AEstrogen receptor-binding stapled peptide SP1protein1164% helix, 0% strand—

Ligands and binding sites

  • ACE · Acetyl group · ligand · chains A
  • NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 modified, 1 covalent (nonstandard, covalent ligand).

Compared structures

  • 2LDC · Solution structure of the estrogen receptor-binding stapled peptide SP1… · the same entry in another collection · chain A against A, TM-score 1.00

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