MolNFT v1 · #43435 · protein

Solution structure of the endonuclease NOB1 from P.HORIKOSHII

2LCQ · Putative toxin VAPC6: “Solution structure of the endonuclease NOB1 from P.HORIKOSHII”. Solution nmr, 1 ligand (ZN). MolNFT v1 #43435 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2LCQ
Type: protein
Length: 161 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative toxin VAPC6
UniProt: O58440
Ligands: ZN

Structure

solution nmr · 1 distinct chain · 37% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative toxin VAPC6	protein	161	37% helix, 14% strand	O58440

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

2LCQ · Solution structure of the endonuclease Nob1 from P.horikoshii · the same entry in another collection · chain A against A, TM-score 1.00
O58440 · AlphaFold monomer V2.0 prediction for endoribonuclease NOB1 (O58440) · a predicted model of the same protein · chain A against A, TM-score 0.67

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O58440
Elsewhere: RCSB PDB 2LCQ · PDBe 2LCQ · UniProt O58440

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