MolNFT v1 · #43306 · protein

Spatial structure of antimicrobial peptide arenicin-2 dimer in dpc micelles

2L8X: “Spatial structure of antimicrobial peptide arenicin-2 dimer in dpc micelles”. Solution nmr. MolNFT v1 #43306 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2L8X
Type: protein
Length: 42 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Arenicin-2
UniProt: Q5SC59

Structure

solution nmr · 1 distinct chain · 0% helix, 67% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Arenicin-2	protein	21	0% helix, 67% strand	Q5SC59

Interfaces

1 interface between chains.

A–B · 533 Å² buried · 12 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

2L8X · Spatial structure of antimicrobial peptide Arenicin-2 dimer in DPC micelles · the same entry in another collection · chain A against A, TM-score 1.00
Q5SC59 · AlphaFold monomer V2.0 prediction for arenicin-2 (Q5SC59) · a predicted model of the same protein · chain B against A, TM-score 0.28

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5SC59
Elsewhere: RCSB PDB 2L8X · PDBe 2L8X · UniProt Q5SC59

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.