MolNFT v1 · #42774 · protein
Rrm domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide
2KT5 · RNA and export factor-binding protein 2: “Rrm domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide”. Solution nmr. MolNFT v1 #42774 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2KT5
- Type
- protein
- Length
- 164 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA and export factor-binding protein 2; ICP27
- UniProt
- Q9JJW6, Q9J0X9
Structure
solution nmr · 2 distinct chains · 12% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA and export factor-binding protein 2 | protein | 124 | 16% helix, 21% strand | Q9JJW6 |
| B | ICP27 | protein | 40 | 0% helix, 0% strand | Q9J0X9 |
Interfaces
1 interface between chains.
- A–B · 707 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 2KT5 · RRM domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide · the same entry in another collection · chain A against A, TM-score 1.00
- Q9JJW6 · AlphaFold monomer V2.0 prediction for ALY/REF export factor 2 (Q9JJW6) · a predicted model of the same protein · chain A against A, TM-score 0.59
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JJW6
- Every structure of UniProt Q9J0X9
- Elsewhere: RCSB PDB 2KT5 · PDBe 2KT5 · UniProt Q9JJW6 · UniProt Q9J0X9
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