MolNFT v1 · #42681 · protein
Solution structure of dnak suppressor protein from agrobacterium tumefaciens C58. northeast structural genomics consortium target ATT12/ONTARIO center for structural proteomics target ATC0888
2KQ9: “Solution structure of dnak suppressor protein from agrobacterium tumefaciens C58. northeast structural…”. Solution nmr, 1 ligand (ZN), 2 pockets (best druggability 0.44). MolNFT v1 #42681 on GenesisL1: 3D structure, binding sites…
- PDB
- 2KQ9
- Type
- protein
- Length
- 112 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dnak suppressor protein
- Ligands
- ZN
- Pockets
- 2 · best druggability 0.44
Structure
solution nmr · 1 distinct chain · 45% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dnak suppressor protein | protein | 112 | 45% helix, 4% strand | — |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 152 | 0.44 | 0.75 | 22 | empty |
| 2 | 69 | 0.31 | 0.74 | 14 | empty |
Compared structures
- 2KQ9 · Solution structure of DnaK suppressor protein from Agrobacterium tumefaciens C58.… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2KQ9 · PDBe 2KQ9
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