MolNFT v1 · #42594 · protein
NMR structure of microplusin a antimicrobial peptide from rhipicephalus (boophilus) microplus
2KNJ · Microplusin preprotein: “NMR structure of microplusin a antimicrobial peptide from rhipicephalus (boophilus) microplus”. Solution nmr, 1 pocket (best druggability 0.37). MolNFT v1 #42594 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2KNJ
- Type
- protein
- Length
- 90 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Microplusin preprotein
- UniProt
- Q86LE5
- Pockets
- 1 · best druggability 0.37
Structure
solution nmr · 1 distinct chain · 62% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Microplusin preprotein | protein | 90 | 62% helix, 0% strand | Q86LE5 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.37 | 0.79 | 14 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 2KNJ · NMR structure of microplusin a antimicrobial peptide from Rhipicephalus (Boophilus)… · the same entry in another collection · chain A against A, TM-score 1.00
- Q86LE5 · AlphaFold monomer V2.0 prediction for antimicrobial peptide microplusin (Q86LE5) · a predicted model of the same protein · chain A against A, TM-score 0.56
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86LE5
- Elsewhere: RCSB PDB 2KNJ · PDBe 2KNJ · UniProt Q86LE5
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