MolNFT v1 · #42505 · protein

Solution NMR structure of an integrase domain from protein SPA4288 from salmonella enterica, northeast structural genomics consortium target SLR105H

2KKV: “Solution NMR structure of an integrase domain from protein SPA4288 from salmonella enterica, northeast…”. Solution nmr, 2 pockets (best druggability 0.63). MolNFT v1 #42505 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 2KKV
Type: protein
Length: 121 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Integrase
UniProt: Q5PJC5
Pockets: 2 · best druggability 0.63

Structure

solution nmr · 1 distinct chain · 49% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Integrase	protein	121	49% helix, 0% strand	Q5PJC5

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	446	0.63	0.77	34	empty
2	82	0.49	0.82	23	empty

Compared structures

2KKV · Solution NMR structure of an integrase domain from protein SPA4288 from Salmonella… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5PJC5
Elsewhere: RCSB PDB 2KKV · PDBe 2KKV · UniProt Q5PJC5

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