MolNFT v1 · #42394 · protein

NMR structure of the domain 6 of the E. COLI ribosomal protein S1

2KHJ · 30S ribosomal protein S1: “NMR structure of the domain 6 of the E. COLI ribosomal protein S1”. Solution nmr, 1 pocket (best druggability 0.26). MolNFT v1 #42394 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2KHJ
Type: protein
Length: 89 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 30S ribosomal protein S1
UniProt: P0AG67
Pockets: 1 · best druggability 0.26

Structure

solution nmr · 1 distinct chain · 8% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	30S ribosomal protein S1	protein	89	8% helix, 34% strand	P0AG67

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.26	0.74	13	empty

Compared structures

2KHJ · NMR structure of the domain 6 of the E. coli ribosomal protein S1 · the same entry in another collection · chain A against A, TM-score 1.00
P0AG67 · AlphaFold monomer V2.0 prediction for 30S ribosomal protein S1 (P0AG67) · a predicted model of the same protein · chain A against A, TM-score 0.64

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0AG67
Elsewhere: RCSB PDB 2KHJ · PDBe 2KHJ · UniProt P0AG67

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