MolNFT v1 · #42061 · protein
Solution NMR structure of integral membrane protein dsbb
2K73 · Disulfide bond formation protein B: “Solution NMR structure of integral membrane protein dsbb”. Solution nmr, 4 pockets (best druggability 0.79). MolNFT v1 #42061 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2K73
- Type
- protein
- Length
- 183 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Disulfide bond formation protein B
- UniProt
- P0A6M2
- Pockets
- 4 · best druggability 0.79
Structure
solution nmr · 1 distinct chain · 58% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Disulfide bond formation protein B | protein | 183 | 58% helix, 2% strand | P0A6M2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 448 | 0.79 | 0.86 | 42 | empty |
| 2 | 85 | 0.71 | 0.94 | 17 | empty |
| 3 | 154 | 0.43 | 0.74 | 24 | empty |
| 4 | 115 | 0.40 | 0.75 | 18 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2K73 · Solution NMR structure of integral membrane protein DsbB · the same entry in another collection · chain A against A, TM-score 1.00
- P0A6M2 · AlphaFold monomer V2.0 prediction for disulfide bond formation protein B (P0A6M2) · a predicted model of the same protein · chain A against A, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A6M2
- Elsewhere: RCSB PDB 2K73 · PDBe 2K73 · UniProt P0A6M2
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