MolNFT v1 · #41949 · protein
RV1761C
2K3M: “RV1761C”. Solution nmr, 1 ligand (MTN), 1 pocket (best druggability 0.69). MolNFT v1 #41949 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2K3M
- Type
- protein
- Length
- 127 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RV1761C
- UniProt
- O06796
- Ligands
- MTN
- Pockets
- 1 · best druggability 0.69
Structure
solution nmr · 1 distinct chain · 50% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RV1761C | protein | 127 | 50% helix, 0% strand | O06796 |
Ligands and binding sites
- MTN · S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate · ligand · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 912 | 0.69 | 0.74 | 74 | MTN |
Modifications
Observed in the structure: 3 covalent (covalent ligand).
Compared structures
- 2K3M · Rv1761c · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O06796
- Elsewhere: RCSB PDB 2K3M · PDBe 2K3M · UniProt O06796
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