MolNFT v1 · #41910 · protein
Solution NMR structure of N-terminal domain of human PIRH2. northeast structural genomics consortium (nesg) target HT2A
2K2C · Ring finger and chy zinc finger domain-containing protein 1: “Solution NMR structure of N-terminal domain of human PIRH2. northeast structural genomics consortium (nesg)…”. Solution nmr, 1 ligand (ZN), 2 pockets (best druggability…
- PDB
- 2K2C
- Type
- protein
- Length
- 137 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ring finger and chy zinc finger domain-containing protein 1
- UniProt
- Q96PM5
- Ligands
- ZN
- Pockets
- 2 · best druggability 0.48
Structure
solution nmr · 1 distinct chain · 5% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ring finger and chy zinc finger domain-containing protein 1 | protein | 137 | 5% helix, 27% strand | Q96PM5 |
Ligands and binding sites
- ZN · Zinc ion · metal · 6 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.48 | 0.84 | 19 | empty |
| 2 | 62 | 0.32 | 0.76 | 11 | empty |
Compared structures
- 2K2C · Solution NMR structure of N-terminal domain of human pirh2. Northeast Structural Genomics… · the same entry in another collection · chain A against A, TM-score 1.00
- Q96PM5 · AlphaFold monomer V2.0 prediction for ring finger and chy zinc finger domain-containing… · a predicted model of the same protein · chain A against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96PM5
- Elsewhere: RCSB PDB 2K2C · PDBe 2K2C · UniProt Q96PM5
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