MolNFT v1 · #41870 · protein

Solution NMR structure of the leech protein saratin, a novel inhibitor of haemostasis

2K13: “Solution NMR structure of the leech protein saratin, a novel inhibitor of haemostasis”. Solution nmr, 1 pocket (best druggability 0.36). MolNFT v1 #41870 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2K13
Type: protein
Length: 103 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Saratin
Pockets: 1 · best druggability 0.36

Structure

solution nmr · 1 distinct chain · 10% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
X	Saratin	protein	103	10% helix, 25% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	75	0.36	0.77	18	empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

2K13 · Solution NMR Structure of the Leech Protein Saratin, a Novel Inhibitor of Haemostasis · the same entry in another collection · chain X against X, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2K13 · PDBe 2K13

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