MolNFT v1 · #41840 · protein

Structure of a locked SDF1 dimer

2K01 · Stromal cell-derived factor 1: “Structure of a locked SDF1 dimer”. Solution nmr. MolNFT v1 #41840 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2K01
Type: protein
Length: 136 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Stromal cell-derived factor 1
UniProt: P48061

Structure

solution nmr · 1 distinct chain · 12% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	Stromal cell-derived factor 1	protein	68	12% helix, 25% strand	P48061

Interfaces

1 interface between chains.

A–C · 1106 Å² buried · 20 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

2K01 · Structure of a locked SDF1 dimer · the same entry in another collection · chain A against A, TM-score 1.00
P48061 · AlphaFold monomer V2.0 prediction for stromal cell-derived factor 1 (P48061) · a predicted model of the same protein · chain A against A, TM-score 0.76

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P48061
Elsewhere: RCSB PDB 2K01 · PDBe 2K01 · UniProt P48061

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