MolNFT v1 · #41764 · protein
Solution structure of S. cerevisiae PDCD5-like protein YMR074CP
2JXN · Uncharacterized protein YMR074C: “Solution structure of S. cerevisiae PDCD5-like protein YMR074CP”. Solution nmr, 1 ligand (MTN). MolNFT v1 #41764 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2JXN
- Type
- protein
- Length
- 116 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein YMR074C
- UniProt
- Q04773
- Ligands
- MTN
Structure
solution nmr · 1 distinct chain · 53% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein YMR074C | protein | 116 | 53% helix, 2% strand | Q04773 |
Ligands and binding sites
- MTN · S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate · ligand · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 2JXN · Solution Structure of S. cerevisiae PDCD5-like Protein Ymr074cp · the same entry in another collection · chain A against A, TM-score 1.00
- Q04773 · AlphaFold monomer V2.0 prediction for uncharacterized protein YMR074C (Q04773) · a predicted model of the same protein · chain A against A, TM-score 0.64
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04773
- Elsewhere: RCSB PDB 2JXN · PDBe 2JXN · UniProt Q04773
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