MolNFT v1 · #4117 · protein

Solution structure of the numb ptb domain complexed to a nak peptide

1DDM · Numb protein: “Solution structure of the numb ptb domain complexed to a nak peptide”. Solution nmr. MolNFT v1 #4117 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1DDM
Type: protein
Length: 146 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Numb protein; Numb associate kinase
EC: 2.7.1.37
UniProt: P16554

Structure

solution nmr · 2 distinct chains · 21% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Numb protein	protein	135	22% helix, 24% strand	P16554
B	Numb associate kinase (EC 2.7.1.37)	protein	11	0% helix, 0% strand	—

Interfaces

1 interface between chains.

A–B · 688 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

1DDM · Solution structure of the numb ptb domain complexed to a nak peptide · the same entry in another collection · chain A against A, TM-score 1.00
P16554 · AlphaFold monomer V2.0 prediction for protein numb (P16554) · a predicted model of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P16554
Elsewhere: RCSB PDB 1DDM · PDBe 1DDM · UniProt P16554

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