MolNFT v1 · #41089 · protein

Parr from plasmid PB171

2JD3 · Stbb protein: “Parr from plasmid PB171”. X-ray diffraction, 1 pocket (best druggability 0.37). MolNFT v1 #41089 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2JD3
Type: protein
Length: 180 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Stbb protein
UniProt: Q9S101
Pockets: 1 · best druggability 0.37

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Stbb protein	protein	90	64% helix, 8% strand	Q9S101

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	84	0.37	0.76	14	empty

Interfaces

1 interface between chains.

A–B · 2964 Å² buried · 25 hydrogen bonds · protein-protein

Compared structures

2JD3 · ParR from plasmid pB171 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9S101
Elsewhere: RCSB PDB 2JD3 · PDBe 2JD3 · UniProt Q9S101

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