MolNFT v1 · #40859 · protein
Crystal structure of the ga module from F.MAGNA
2J5Y · Peptostreptococcal albumin-binding protein: “Crystal structure of the ga module from F.MAGNA”. X-ray diffraction, 1 pocket (best druggability 0.54). MolNFT v1 #40859 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2J5Y
- Type
- protein
- Length
- 122 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptostreptococcal albumin-binding protein
- UniProt
- Q51911
- Pockets
- 1 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Peptostreptococcal albumin-binding protein | protein | 61 | 70% helix, 0% strand | Q51911 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 130 | 0.54 | 0.82 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 477 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 2J5Y · Crystal structure of the GA module from F.magna · the same entry in another collection · chain A against A, TM-score 1.00
- Q51911 · AlphaFold monomer V2.0 prediction for peptostreptococcal albumin- binding protein (Q51911) · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q51911
- Elsewhere: RCSB PDB 2J5Y · PDBe 2J5Y · UniProt Q51911
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