MolNFT v1 · #40635 · protein
Crystal structure of the N-terminal dimer domain of E.COLI dsbc
2IYJ · Thiol disulfide interchange protein dsbc: “Crystal structure of the N-terminal dimer domain of E.COLI dsbc”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #40635 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2IYJ
- Type
- protein
- Length
- 145 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Thiol disulfide interchange protein dsbc
- UniProt
- P0AEG6
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 28% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thiol disulfide interchange protein dsbc | protein | 70 | 26% helix, 36% strand | P0AEG6 |
| B | Thiol disulfide interchange protein dsbc | protein | 75 | 31% helix, 33% strand | P0AEG6 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 925 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 2IYJ · Crystal structure of the N-terminal dimer domain of E.coli DsbC · the same entry in another collection · chain A against A, TM-score 1.00
- P0AEG6 · AlphaFold monomer V2.0 prediction for THIOL:DISULFIDE interchange protein dsbc (P0AEG6) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AEG6
- Elsewhere: RCSB PDB 2IYJ · PDBe 2IYJ · UniProt P0AEG6
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