MolNFT v1 · #40345 · protein

Crystal structure of protein AF1212 from archaeoglobus fulgidus, pfam drtgg

2IOJ · Hypothetical protein AF_1212: “Crystal structure of protein AF1212 from archaeoglobus fulgidus, pfam drtgg”. X-ray diffraction, 2 pockets (best druggability 0.45). MolNFT v1 #40345 on GenesisL1: 3D structure, binding sites and…

PDB: 2IOJ
Type: protein
Length: 240 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein AF_1212
UniProt: O29056
Pockets: 2 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein AF_1212	protein	120	35% helix, 26% strand	O29056

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	159	0.45	0.76	20	empty
2	76	0.38	0.78	21	empty

Interfaces

1 interface between chains.

A–B · 272 Å² buried · 6 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

2IOJ · Crystal structure of protein AF1212 from Archaeoglobus fulgidus, Pfam DRTGG · the same entry in another collection · chain A against A, TM-score 1.00
O29056 · AlphaFold monomer V2.0 prediction for uncharacterized protein AF_1212 (O29056) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O29056
Elsewhere: RCSB PDB 2IOJ · PDBe 2IOJ · UniProt O29056

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