MolNFT v1 · #39989 · protein
The coiled-coil domain (residues 1-75) structure of the sin nombre virus nucleocapsid protein
2IC6: “The coiled-coil domain (residues 1-75) structure of the sin nombre virus nucleocapsid protein”. X-ray diffraction, 1 pocket (best druggability 0.53). MolNFT v1 #39989 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2IC6
- Type
- protein
- Length
- 147 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleocapsid protein
- UniProt
- Q81930
- Pockets
- 1 · best druggability 0.53
Structure
x-ray diffraction · 2 distinct chains · 93% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleocapsid protein | protein | 71 | 93% helix, 0% strand | Q81930 |
| B | Nucleocapsid protein | protein | 76 | 93% helix, 0% strand | Q81930 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 177 | 0.53 | 0.79 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 353 Ų buried · 13 hydrogen bonds · protein-protein
Compared structures
- 2IC6 · The Coiled-coil Domain (residues 1-75) Structure of the Sin Nombre Virus Nucleocapsid… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q81930
- Elsewhere: RCSB PDB 2IC6 · PDBe 2IC6 · UniProt Q81930
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