MolNFT v1 · #39590 · protein

Crystal structure of RV0805 D66A mutant

2HYP · Hypothetical protein RV0805: “Crystal structure of RV0805 D66A mutant”. X-ray diffraction, 3 ligands (FE, MN, BR), 1 pocket (best druggability 0.39). MolNFT v1 #39590 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2HYP
Type: protein
Length: 230 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein RV0805
EC: 3.1.4.17
UniProt: O06629
Ligands: FE, MN, BR
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 27% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein RV0805 (EC 3.1.4.17)	protein	230	27% helix, 26% strand	O06629

Ligands and binding sites

FE · Fe (III) ion · metal · chains A
MN · Manganese (II) ion · metal · chains A
BR · Bromide ion · ion · 4 copies · chains A
CAC · Cacodylate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	89	0.39	0.77	15	empty

Compared structures

2HYP · Crystal structure of Rv0805 D66A mutant · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O06629
Elsewhere: RCSB PDB 2HYP · PDBe 2HYP · UniProt O06629

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