MolNFT v1 · #39290 · protein

Crystal structure of the mouse P97/PNGASE complex

2HPL: “Crystal structure of the mouse P97/PNGASE complex”. X-ray diffraction. MolNFT v1 #39290 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2HPL
Type: protein
Length: 105 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pngase; C-terminal of mouse P97/VCP
EC: 3.5.1.52
UniProt: Q9JI78

Structure

x-ray diffraction · 2 distinct chains · 57% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pngase (EC 3.5.1.52)	protein	100	60% helix, 8% strand	Q9JI78
B	C-terminal of mouse P97/VCP	protein	5	0% helix, 0% strand	—

Interfaces

1 interface between chains.

A–B · 364 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

2HPL · Crystal structure of the mouse p97/PNGase complex · the same entry in another collection · chain A against A, TM-score 1.00
Q9JI78 · AlphaFold monomer V2.0 prediction for peptide-N(4)-(N-acetyl-beta… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9JI78
Elsewhere: RCSB PDB 2HPL · PDBe 2HPL · UniProt Q9JI78

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