MolNFT v1 · #39285 · protein
Comparison of the structures of HIV-2 protease complexes in three crystal space groups with an HIV-1 protease complex structure
2HPF: “Comparison of the structures of HIV-2 protease complexes in three crystal space groups with an HIV-1 protease…”. X-ray diffraction. MolNFT v1 #39285 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2HPF
- Type
- protein
- Length
- 206 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- HIV-2 protease; Unidentified peptide fragment
- UniProt
- P04584
Structure
x-ray diffraction · 2 distinct chains · 0% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | HIV-2 protease | protein | 99 | 0% helix, 48% strand | P04584 |
| S | Unidentified peptide fragment | protein | 8 | 0% helix, 13% strand | — |
Interfaces
3 interfaces between chains.
- A–B · 1759 Ų buried · 27 hydrogen bonds · protein-protein
- B–S · 399 Ų buried · 6 hydrogen bonds · protein-protein
- A–S · 317 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 2HPF · Comparison of the structures of HIV-2 protease complexes in three crystal space groups… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04584
- Elsewhere: RCSB PDB 2HPF · PDBe 2HPF · UniProt P04584
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