MolNFT v1 · #39164 · DNA
Solution structure of crotonaldehyde-derived N2-[3-oxo-1(S)-methyl- propyl]-dg DNA adduct in the 5'-cpg-3' sequence
2HLI · DNA dodecamer with S-crotonaldehyde adduct: “Solution structure of crotonaldehyde-derived N2-[3-oxo-1(S)-methyl- propyl]-dg DNA adduct in the 5'-cpg-3'…”. Solution nmr. MolNFT v1 #39164 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2HLI
- Type
- DNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA dodecamer with S-crotonaldehyde adduct; DNA dodecamer
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA dodecamer with S-crotonaldehyde adduct | dna | 12 | — | — |
| B | DNA dodecamer | dna | 12 | — | — |
Interfaces
1 interface between chains.
- A–B · 597 Ų buried · 59 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 2HLI · Solution structure of Crotonaldehyde-Derived N2-[3-Oxo-1(S)-methyl-propyl]-dG DNA Adduct… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2HLI · PDBe 2HLI
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