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MolNFT v1 · #38975 · protein

Structure of S65T Y66F R96A GFP variant in precursor state

2HFC · Green fluorescent protein: “Structure of S65T Y66F R96A GFP variant in precursor state”. X-ray diffraction, 1 ligand (MG), 1 pocket (best druggability 0.33). MolNFT v1 #38975 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
2HFC
Type
protein
Length
232 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Green fluorescent protein
UniProt
P42212
Ligands
MG
Pockets
1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 50% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGreen fluorescent proteinprotein23215% helix, 50% strandP42212

Ligands and binding sites

  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1560.330.7713empty

Compared structures

  • 2HFC · Structure of S65T Y66F R96A GFP variant in precursor state · the same entry in another collection · chain A against A, TM-score 1.00
  • P42212 · AlphaFold monomer V2.0 prediction for green fluorescent protein (P42212) · a predicted model of the same protein · chain A against A, TM-score 0.99

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