MolNFT v1 · #38771 · protein
Structure of empty pheromone binding protein ASP1 from the honeybee apis mellifera L
2H8V · Pheromone-binding protein ASP1: “Structure of empty pheromone binding protein ASP1 from the honeybee apis mellifera L”. X-ray diffraction, 2 ligands (SO4, CL). MolNFT v1 #38771 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 2H8V
- Type
- protein
- Length
- 117 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pheromone-binding protein ASP1
- UniProt
- Q9U9J6
- Ligands
- SO4, CL
Structure
x-ray diffraction · 1 distinct chain · 64% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pheromone-binding protein ASP1 | protein | 117 | 64% helix, 2% strand | Q9U9J6 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A
- CL · Chloride ion · ion · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 2H8V · Structure of empty Pheromone Binding Protein ASP1 from the Honeybee Apis mellifera L · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9U9J6
- Elsewhere: RCSB PDB 2H8V · PDBe 2H8V · UniProt Q9U9J6
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