GL1X · GenesisL1 explorer

MolNFT v1 · #38615 · protein

Cis-azobenzene-avian pancreatic polypeptide bound to dpc micelles

2H3S · Pancreatic hormone: “Cis-azobenzene-avian pancreatic polypeptide bound to dpc micelles”. Solution nmr, 2 ligands (ZAB, NH2). MolNFT v1 #38615 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2H3S
Type
protein
Length
33 residues
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Pancreatic hormone
UniProt
P68249
Ligands
ZAB, NH2

Structure

solution nmr · 2 distinct chains · 64% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APancreatic hormoneprotein90% helix, 0% strandP68249
BPancreatic hormoneprotein2488% helix, 0% strandP68249

Ligands and binding sites

  • ZAB · (3-{(Z)-[3-(aminomethyl)phenyl]diazenyl}phenyl)acetic acid · ligand · chains A, B
  • NH2 · Amino group · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 176 Ų buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 covalent (covalent ligand).

Compared structures

  • 2H3S · cis-Azobenzene-avian pancreatic polypeptide bound to DPC micelles · the same entry in another collection · chain A against A, TM-score 1.00
  • P68249 · AlphaFold monomer V2.0 prediction for pancreatic hormone (P68249) · a predicted model of the same protein · chain B against A, TM-score 0.45

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