MolNFT v1 · #38368 · RNA

Solution structure of the poliovirus 3'-utr Y-stem

2GV4 · Short RNA strand 5'-ggaccucucgaaagaguggucc-3': “Solution structure of the poliovirus 3'-utr Y-stem”. Solution nmr, 1 pocket (best druggability 0.47). MolNFT v1 #38368 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2GV4
Type: RNA
Length: 22 nucleotides
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Short RNA strand 5'-ggaccucucgaaagaguggucc-3'
Pockets: 1 · best druggability 0.47

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Short RNA strand 5'-ggaccucucgaaagaguggucc-3'	rna	22	—	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	224	0.47	0.74	16	empty

Compared structures

2GV4 · Solution structure of the poliovirus 3'-UTR Y-stem · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2GV4 · PDBe 2GV4

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