MolNFT v1 · #38351 · protein
Crystal structure of the conserved protein of unknown function from porphyromonas gingivalis
2GUK · Hypothetical protein PG1857: “Crystal structure of the conserved protein of unknown function from porphyromonas gingivalis”. X-ray diffraction, 1 pocket (best druggability 0.39). MolNFT v1 #38351 on GenesisL1: 3D structure, binding…
- PDB
- 2GUK
- Type
- protein
- Length
- 223 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein PG1857
- Pockets
- 1 · best druggability 0.39
Structure
x-ray diffraction · 2 distinct chains · 57% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein PG1857 | protein | 111 | 57% helix, 16% strand | — |
| B | Hypothetical protein PG1857 | protein | 112 | 58% helix, 17% strand | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.39 | 0.79 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 924 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified, 4 disulfide (engineered, disulfide).
Compared structures
- 2GUK · Crystal Structure of the Conserved Protein of Unknown Function from Porphyromonas… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2GUK · PDBe 2GUK
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