MolNFT v1 · #38304 · protein
Crystal structure of SARS coronavirus main peptidase (with an additional ala at the N-terminus of each protomer) in the space group P43212
2GT8 · 3C-like proteinase: “Crystal structure of SARS coronavirus main peptidase (with an additional ala at the N-terminus of each…”. X-ray diffraction, 2 pockets (best druggability 0.45). MolNFT v1 #38304 on GenesisL1: 3D structure…
- PDB
- 2GT8
- Type
- protein
- Length
- 298 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 3C-like proteinase
- EC
- 3.4.22.-
- UniProt
- P59641
- Pockets
- 2 · best druggability 0.45
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 3C-like proteinase (EC 3.4.22.-) | protein | 298 | 27% helix, 29% strand | P59641 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 154 | 0.45 | 0.75 | 29 | empty |
| 2 | 90 | 0.40 | 0.77 | 23 | empty |
Compared structures
- 2GT8 · Crystal structure of SARS coronavirus main peptidase (with an additional Ala at the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P59641
- Elsewhere: RCSB PDB 2GT8 · PDBe 2GT8 · UniProt P59641
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