MolNFT v1 · #38042 · protein

Crystal structure of the N-terminally truncated OMTKY3- DEL(1-5)

2GKR · Ovomucoid: “Crystal structure of the N-terminally truncated OMTKY3- DEL(1-5)”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #38042 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2GKR
Type: protein
Length: 51 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ovomucoid
UniProt: P68390
Ligands: CL

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
I	Ovomucoid	protein	51	20% helix, 18% strand	P68390

Ligands and binding sites

CL · Chloride ion · ion · chains I

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

2GKR · Crystal structure of the N-terminally truncated OMTKY3-del(1-5) · the same entry in another collection · chain I against I, TM-score 1.00
P68390 · AlphaFold monomer V2.0 prediction for ovomucoid (P68390) · a predicted model of the same protein · chain I against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P68390
Elsewhere: RCSB PDB 2GKR · PDBe 2GKR · UniProt P68390

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