GL1X · GenesisL1 explorer

MolNFT v1 · #37944 · protein

H-CHK1 complexed with A431994

2GHG · SERINE/THREONINE-protein kinase CHK1: “H-CHK1 complexed with A431994”. X-ray diffraction, 1 ligand (A53), 2 pockets (best druggability 0.64). MolNFT v1 #37944 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2GHG
Type
protein
Length
269 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SERINE/THREONINE-protein kinase CHK1
EC
2.7.1.37
UniProt
O14757
Ligands
A53
Pockets
2 · best druggability 0.64

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 16% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASERINE/THREONINE-protein kinase CHK1 (EC 2.7.1.37)protein26931% helix, 16% strandO14757

Ligands and binding sites

  • A53 · 5-{5-[(S)-2-amino-3-(1H-indol-3-yl)-propoxyl]-pyridin-3-yl}-3-[1-(1H-pyrrol-2-yl)-meth-(Z)-ylidene]-1,3-dihydro-indol-2-one · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12990.640.8129A53
2660.340.7718empty

Compared structures

  • 2GHG · h-CHK1 complexed with A431994 · the same entry in another collection · chain A against A, TM-score 1.00
  • 2C3L · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.96
  • 2C3K · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.96
  • O14757 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase CHK1 (O14757) · a predicted model of the same protein · chain A against A, TM-score 0.96
  • 2C3J · Identification of a buried pocket for potent and selective inhibition of CHK1: prediction… · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

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