GL1X · GenesisL1 explorer

MolNFT v1 · #37776 · protein

S73A mutant of L. casei fpgs

2GC6 · Folylpolyglutamate synthase: “S73A mutant of L. casei fpgs”. X-ray diffraction, 1 ligand (SO4), 4 pockets (best druggability 0.68). MolNFT v1 #37776 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
2GC6
Type
protein
Length
407 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Folylpolyglutamate synthase
EC
6.3.2.17
UniProt
P15925
Ligands
SO4
Pockets
4 · best druggability 0.68

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 18% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AFolylpolyglutamate synthase (EC 6.3.2.17)protein40742% helix, 18% strandP15925

Ligands and binding sites

  • SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
15490.680.7858SO4
21000.460.8020empty
3980.410.7720empty
4980.350.7421empty

Modifications

Observed in the structure: 1 modified (carboxylation).

Compared structures

  • 2GC6 · S73A mutant of L. casei FPGS · the same entry in another collection · chain A against A, TM-score 1.00
  • P15925 · AlphaFold monomer V2.0 prediction for folylpolyglutamate synthase (P15925) · a predicted model of the same protein · chain A against A, TM-score 0.96

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