MolNFT v1 · #37672 · RNA
Crystal structure analysis of the an RNA nonamer R(GGUGCGC) D(BRC)R(C)
2G91 · 5'-R(*GP*GP*UP*GP*CP*GP*CP*(CBR)P*C-3': “Crystal structure analysis of the an RNA nonamer R(GGUGCGC) D(BRC)R(C)”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #37672 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2G91
- Type
- RNA
- Length
- 17 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(*GP*GP*UP*GP*CP*GP*CP*(CBR)P*C-3'
- Ligands
- MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-R(*GP*GP*UP*GP*CP*GP*CP*(CBR)P*C-3' | rna | 9 | — | — |
| B | 5'-R(*GP*GP*UP*GP*CP*GP*CP*(CBR)P*C-3' | rna | 8 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 404 Ų buried · 34 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 2G91 · Crystal Structure Analysis of the an RNA nonamer r(GGUGCGC)d(BrC)r(C) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2G91 · PDBe 2G91
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