MolNFT v1 · #37116 · protein
Pnra from treponema pallidum as purified from E. COLI (bound to inosine)
2FQW · Membrane lipoprotein tmpc: “Pnra from treponema pallidum as purified from E. COLI (bound to inosine)”. X-ray diffraction, 1 ligand (NOS), 1 pocket (best druggability 0.68). MolNFT v1 #37116 on GenesisL1: 3D structure, binding sites…
- PDB
- 2FQW
- Type
- protein
- Length
- 316 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Membrane lipoprotein tmpc
- UniProt
- P29724
- Ligands
- NOS
- Pockets
- 1 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Membrane lipoprotein tmpc | protein | 316 | 43% helix, 21% strand | P29724 |
Ligands and binding sites
- NOS · Inosine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 177 | 0.68 | 0.87 | 38 | NOS |
Compared structures
- 2FQW · PnrA from Treponema pallidum as purified from E. coli (bound to inosine) · the same entry in another collection · chain A against A, TM-score 1.00
- P29724 · AlphaFold monomer V2.0 prediction for membrane lipoprotein tmpc (P29724) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29724
- Elsewhere: RCSB PDB 2FQW · PDBe 2FQW · UniProt P29724
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