MolNFT v1 · #37079 · protein

The crystal structure of the ywmb protein from bacillus subtilis

2FPN: “The crystal structure of the ywmb protein from bacillus subtilis”. X-ray diffraction, 1 pocket (best druggability 0.38). MolNFT v1 #37079 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2FPN
Type: protein
Length: 205 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ywmb
Pockets: 1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ywmb	protein	205	28% helix, 40% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	91	0.38	0.76	22	empty

Modifications

Observed in the structure: 7 modified (engineered).

Compared structures

2FPN · The crystal structure of the ywmB protein from Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2FPN · PDBe 2FPN

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