MolNFT v1 · #36891 · protein
Crystal structure of bacteriophage 186
2FJR · Repressor protein ci: “Crystal structure of bacteriophage 186”. X-ray diffraction, 4 pockets (best druggability 0.60). MolNFT v1 #36891 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2FJR
- Type
- protein
- Length
- 378 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Repressor protein ci
- UniProt
- P08707
- Pockets
- 4 · best druggability 0.60
Structure
x-ray diffraction · 1 distinct chain · 25% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Repressor protein ci | protein | 189 | 25% helix, 36% strand | P08707 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 392 | 0.60 | 0.77 | 50 | empty |
| 2 | 117 | 0.53 | 0.82 | 24 | empty |
| 3 | 165 | 0.44 | 0.75 | 19 | empty |
| 4 | 84 | 0.39 | 0.77 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 1099 Ų buried · 25 hydrogen bonds · protein-protein
Compared structures
- 2FJR · Crystal Structure of Bacteriophage 186 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08707
- Elsewhere: RCSB PDB 2FJR · PDBe 2FJR · UniProt P08707
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