MolNFT v1 · #36508 · protein
Structure of acetylcitrulline deacetylase complexed with one co
2F7V · Aectylcitrulline deacetylase: “Structure of acetylcitrulline deacetylase complexed with one co”. X-ray diffraction, 1 ligand (CO), 1 pocket (best druggability 0.48). MolNFT v1 #36508 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2F7V
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aectylcitrulline deacetylase
- EC
- 3.5.1.16
- UniProt
- Q8P8J5
- Ligands
- CO
- Pockets
- 1 · best druggability 0.48
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aectylcitrulline deacetylase (EC 3.5.1.16) | protein | 360 | 30% helix, 24% strand | Q8P8J5 |
Ligands and binding sites
- CO · Cobalt (II) ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 226 | 0.48 | 0.74 | 26 | empty |
Compared structures
- 2F7V · Structure of acetylcitrulline deacetylase complexed with one Co · the same entry in another collection · chain A against A, TM-score 1.00
- Q8P8J5 · AlphaFold monomer V2.0 prediction for N-acetyl-L-citrulline deacetylase (Q8P8J5) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8P8J5
- Elsewhere: RCSB PDB 2F7V · PDBe 2F7V · UniProt Q8P8J5
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