MolNFT v1 · #35674 · protein
Crystal structure of NAD-dependent alcohol dehydrogenase
2EIH: “Crystal structure of NAD-dependent alcohol dehydrogenase”. X-ray diffraction, 1 ligand (ZN), 4 pockets (best druggability 0.75). MolNFT v1 #35674 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2EIH
- Type
- protein
- Length
- 686 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alcohol dehydrogenase
- UniProt
- Q5SL27
- Ligands
- ZN
- Pockets
- 4 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Alcohol dehydrogenase | protein | 343 | 31% helix, 27% strand | Q5SL27 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 349 | 0.75 | 0.86 | 50 | empty |
| 2 | 451 | 0.71 | 0.81 | 49 | empty |
| 3 | 56 | 0.36 | 0.79 | 14 | empty |
| 4 | 50 | 0.23 | 0.72 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 383 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 2EIH · Crystal Structure of NAD-dependent alcohol dehydrogenase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SL27
- Elsewhere: RCSB PDB 2EIH · PDBe 2EIH · UniProt Q5SL27
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