MolNFT v1 · #35179 · protein

Crystal structure of cert start domain

2E3M · Lipid-transfer protein cert: “Crystal structure of cert start domain”. X-ray diffraction, 3 pockets (best druggability 0.85). MolNFT v1 #35179 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2E3M
Type: protein
Length: 237 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lipid-transfer protein cert
UniProt: Q53YV2
Pockets: 3 · best druggability 0.85

Structure

x-ray diffraction · 1 distinct chain · 25% helix, 37% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lipid-transfer protein cert	protein	237	25% helix, 37% strand	Q53YV2

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	543	0.85	0.91	49	empty
2	75	0.35	0.76	17	empty
3	58	0.27	0.74	16	empty

Compared structures

2E3M · Crystal structure of CERT START domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q53YV2
Elsewhere: RCSB PDB 2E3M · PDBe 2E3M · UniProt Q53YV2

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