MolNFT v1 · #35163 · protein

The minimized average structure of L11 with rg refinement

2E35 · 50S ribosomal protein L11: “The minimized average structure of L11 with rg refinement”. Solution nmr, 2 pockets (best druggability 0.43). MolNFT v1 #35163 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2E35
Type: protein
Length: 147 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 50S ribosomal protein L11
UniProt: P36238
Pockets: 2 · best druggability 0.43

Structure

solution nmr · 1 distinct chain · 33% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L11	protein	147	33% helix, 19% strand	P36238

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	61	0.43	0.81	18	empty
2	58	0.27	0.73	15	empty

Compared structures

2E35 · the minimized average structure of L11 with rg refinement · the same entry in another collection · chain A against A, TM-score 1.00
P36238 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L11 (P36238) · a predicted model of the same protein · chain A against A, TM-score 0.48

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36238
Elsewhere: RCSB PDB 2E35 · PDBe 2E35 · UniProt P36238

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