MolNFT v1 · #35117 · protein
Crystal structure of dendranthema morifolium dmat
2E1U · Acyl transferase: “Crystal structure of dendranthema morifolium dmat”. X-ray diffraction, 11 pockets (best druggability 0.86). MolNFT v1 #35117 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2E1U
- Type
- protein
- Length
- 880 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acyl transferase
- EC
- 2.-.-.-
- UniProt
- A4PHY4
- Pockets
- 11 · best druggability 0.86
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Acyl transferase (EC 2.-.-.-) | protein | 440 | 39% helix, 25% strand | A4PHY4 |
Pockets
11 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 658 | 0.86 | 0.90 | 115 | empty |
| 2 | 296 | 0.85 | 0.96 | 44 | empty |
| 3 | 587 | 0.84 | 0.89 | 91 | empty |
| 4 | 102 | 0.56 | 0.85 | 18 | empty |
| 5 | 116 | 0.55 | 0.83 | 22 | empty |
Interfaces
1 interface between chains.
- A–B · 1726 Ų buried · 25 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 2E1U · Crystal structure of Dendranthema morifolium DmAT · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4PHY4
- Elsewhere: RCSB PDB 2E1U · PDBe 2E1U · UniProt A4PHY4
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