MolNFT v1 · #35027 · protein
Crystal structure of ribosome-binding factor a from thermus thermophilus HB8
2DYJ: “Crystal structure of ribosome-binding factor a from thermus thermophilus HB8”. X-ray diffraction. MolNFT v1 #35027 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2DYJ
- Type
- protein
- Length
- 181 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ribosome-binding factor a
- UniProt
- Q5SJV1
Structure
x-ray diffraction · 2 distinct chains · 46% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome-binding factor a | protein | 91 | 46% helix, 22% strand | Q5SJV1 |
| B | Ribosome-binding factor a | protein | 90 | 46% helix, 22% strand | Q5SJV1 |
Interfaces
1 interface between chains.
- A–B · 700 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 2DYJ · Crystal structure of ribosome-binding factor A from Thermus thermophilus HB8 · the same entry in another collection · chain A against A, TM-score 1.00
- Q5SJV1 · AlphaFold monomer V2.0 prediction for ribosome-binding factor a (Q5SJV1) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5SJV1
- Elsewhere: RCSB PDB 2DYJ · PDBe 2DYJ · UniProt Q5SJV1
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