MolNFT v1 · #34978 · protein

Crystal structure of bromodomain-containing protein 4

2DWW: “Crystal structure of bromodomain-containing protein 4”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.45). MolNFT v1 #34978 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2DWW
Type: protein
Length: 114 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bromodomain-containing protein 4
UniProt: Q9ESU6
Ligands: CL
Pockets: 1 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 68% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bromodomain-containing protein 4	protein	114	68% helix, 0% strand	Q9ESU6

Ligands and binding sites

CL · Chloride ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	116	0.45	0.78	19	empty

Modifications

Observed in the structure: 7 modified (engineered).

Compared structures

2DWW · Crystal structure of Bromodomain-containing protein 4 · the same entry in another collection · chain A against A, TM-score 1.00
Q9ESU6 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 4 (Q9ESU6) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9ESU6
Elsewhere: RCSB PDB 2DWW · PDBe 2DWW · UniProt Q9ESU6

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