MolNFT v1 · #34973 · protein
Crystal structure of the human wa rotavirus VP8* carbohydrate- recognising domain
2DWR · Outer capsid protein: “Crystal structure of the human wa rotavirus VP8* carbohydrate- recognising domain”. X-ray diffraction. MolNFT v1 #34973 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2DWR
- Type
- protein
- Length
- 160 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer capsid protein
- UniProt
- Q86202
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer capsid protein | protein | 160 | 8% helix, 57% strand | Q86202 |
Ligands and binding sites
- GOL · Glycerol · additive · 2 copies · chains A
- IPA · Isopropyl alcohol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 2DWR · Crystal structure of the human Wa rotavirus VP8* carbohydrate-recognising domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86202
- Elsewhere: RCSB PDB 2DWR · PDBe 2DWR · UniProt Q86202
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